| 1. Round | 22/07/2023 | MFK Karviná | - | FC Zlín | 4:1 | ||||
| 2. Round | 29/07/2023 | FC Zlín | - | AC Sparta Praha | 0:1 | ||||
| 3. Round | 06/08/2023 | Slavia Praha | - | FC Zlín | 2:1 | ||||
| 4. Round | 12/08/2023 | FC Zlín | - | Slovan Liberec | 1:1 | ||||
| 5. Round | 20/08/2023 | FC Hradec Králové | - | FC Zlín | 2:0 | ||||
| 6. Round | 26/08/2023 | FC Zlín | - | FK Teplice | 2:1 | ||||
| 8. Round | 17/09/2023 | FC Zlín | - | Viktoria Plzeň | 1:7 | ||||
| 9. Round | 23/09/2023 | Baník Ostrava | - | FC Zlín | 5:1 | ||||
| 10. Round | 30/09/2023 | FC Zlín | - | Dynamo České Budějovice | 1:1 | ||||
| 11. Round | 07/10/2023 | Bohemians Praha 1905 | - | FC Zlín | 0:0 | ||||
| 12. Round | 21/10/2023 | FC Zlín | - | FK Mladá Boleslav | 5:9 | ||||
| 20. Round | 11/02/2024 | FK Teplice | - | FC Zlín | 2:1 | ||||
| 17. Round | 14/02/2024 | FC Zlín | - | Slavia Praha | 1:1 | ||||
| 21. Round | 18/02/2024 | FC Zlín | - | 1. FC Slovácko | 2:1 | ||||
| 22. Round | 24/02/2024 | Viktoria Plzeň | - | FC Zlín | 3:0 | ||||
| 23. Round | 03/03/2024 | FC Zlín | - | Baník Ostrava | 0:1 | ||||
| 26. Round | 31/03/2024 | FK Mladá Boleslav | - | FC Zlín | 3:2 | ||||
| 27. Round | 06/04/2024 | FC Zlín | - | Sigma Olomouc | 3:2 |
Czech Republic