| 1. Round | 10/08/2024 | 1. FC Slovácko [Youth] | - | FK Mladá Boleslav [Youth] | 4:2 | ||||
| 8. Round | 28/09/2024 | FK Mladá Boleslav [Youth] | - | Viktoria Plzeň [Youth] | 2:2 | ||||
| 9. Round | 05/10/2024 | Vysočina Jihlava [Youth] | - | FK Mladá Boleslav [Youth] | 2:0 | ||||
| 11. Round | 19/10/2024 | FK Mladá Boleslav [Youth] | - | FK Pardubice [Youth] | 3:1 | ||||
| 5. Round | 23/10/2024 | Banik Ostrava [Youth] | - | FK Mladá Boleslav [Youth] | 3:3 | ||||
| 6. Round | 30/10/2024 | FK Mladá Boleslav [Youth] | - | Dynamo České Budějovice [Youth] | 2:2 | ||||
| 13. Round | 02/11/2024 | FK Mladá Boleslav [Youth] | - | FK Jablonec [Youth] | 1:5 | ||||
| 15. Round | 16/11/2024 | FK Mladá Boleslav [Youth] | - | SFC Opava [Youth] | 2:1 | ||||
| 17. Round | 14/03/2025 | FC Zlín [Youth] | - | FK Mladá Boleslav [Youth] | 7:2 | ||||
| 27. Round | 24/05/2025 | FK Mladá Boleslav [Youth] | - | Slavia Praha [Youth] | 2:1 | ||||
| 28. Round | 31/05/2025 | FK Jablonec [Youth] | - | FK Mladá Boleslav [Youth] | 2:3 |  |
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| 29. Round | 07/06/2025 | FK Mladá Boleslav [Youth] | - | Slovan Liberec [Youth] | 1:4 |
Czech Republic