| 17. Round | 19/02/2017 | FC Hradec Králové | - | FK Dukla Praha | 0:2 |  |
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| 18. Round | 25/02/2017 | FK Dukla Praha | - | MFK Karviná | 0:0 | ||||
| 19. Round | 04/03/2017 | AC Sparta Praha | - | FK Dukla Praha | 1:0 | ||||
| 20. Round | 11/03/2017 | FK Dukla Praha | - | FK Jablonec | 1:0 | ||||
| 21. Round | 19/03/2017 | Bohemians Praha 1905 | - | FK Dukla Praha | 1:2 | |
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| 22. Round | 01/04/2017 | Zbrojovka Brno | - | FK Dukla Praha | 0:0 | ||||
| 23. Round | 07/04/2017 | FK Dukla Praha | - | FK Mladá Boleslav | 1:2 | ||||
| 24. Round | 16/04/2017 | Slovan Liberec | - | FK Dukla Praha | 3:1 | ||||
| 25. Round | 21/04/2017 | FK Dukla Praha | - | Vysočina Jihlava | 4:1 | |
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| 26. Round | 29/04/2017 | Viktoria Plzeň | - | FK Dukla Praha | 2:0 | ||||
| 27. Round | 05/05/2017 | FK Dukla Praha | - | 1. FK Příbram | 3:1 | |
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| 28. Round | 13/05/2017 | Slavia Praha | - | FK Dukla Praha | 2:2 | ||||
| 29. Round | 20/05/2017 | FK Dukla Praha | - | FC Fastav Zlín | 1:0 | |
Czech Republic