| 1. Round | 03/08/2008 | FK Teplice | - | Dynamo České Budějovice | 4:0 | ||||
| 2. Round | 10/08/2008 | Dynamo České Budějovice | - | Bohemians Praha | 0:0 | ||||
| 3. Round | 17/08/2008 | 1. FK Příbram | - | Dynamo České Budějovice | 3:0 | ||||
| 11. Round | 26/10/2008 | 1. FC Brno | - | Dynamo České Budějovice | 1:1 | ||||
| 16. Round | 30/11/2008 | Bohemians Praha | - | Dynamo České Budějovice | 2:0 |
Czech Republic