| 1. Round | 05/03/2006 | RB Omiya Ardija | - | JEF United Chiba | 4:2 | ||||
| 3. Round | 18/03/2006 | JEF United Chiba | - | Avispa Fukuoka | 2:2 | ||||
| 13. Round | 19/07/2006 | JEF United Chiba | - | Gamba Osaka | 1:2 | ||||
| 16. Round | 30/07/2006 | JEF United Chiba | - | Nagoya Grampus Eight | 2:3 | ||||
| 19. Round | 23/08/2006 | Júbilo Iwata | - | JEF United Chiba | 3:1 | ||||
| 21. Round | 30/08/2006 | JEF United Chiba | - | Kawasaki Frontale | 1:2 | ||||
| 24. Round | 23/09/2006 | JEF United Chiba | - | Kyoto Purple Sanga | 2:0 | ||||
| 31. Round | 19/11/2006 | Gamba Osaka | - | JEF United Chiba | 1:0 | ||||
| 33. Round | 26/11/2006 | Ventforet Kofu | - | JEF United Chiba | 2:3 | ||||
| 34. Round | 02/12/2006 | JEF United Chiba | - | Yokohama F. Marinos | 0:2 |
Japan