| 2. Round | 09/07/2016 | Júbilo Iwata | - | RB Omiya Ardija | 1:1 | ||||
| 3. Round | 13/07/2016 | RB Omiya Ardija | - | Gamba Osaka | 0:0 | ||||
| 4. Round | 17/07/2016 | Urawa Red Diamonds | - | RB Omiya Ardija | 2:2 |  |
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| 5. Round | 23/07/2016 | RB Omiya Ardija | - | Albirex Niigata | 1:2 | ||||
| 6. Round | 30/07/2016 | Vissel Kobe | - | RB Omiya Ardija | 1:0 | ||||
| 13. Round | 25/09/2016 | RB Omiya Ardija | - | Sagan Tosu | 1:1 | ||||
| 14. Round | 01/10/2016 | Kashima Antlers | - | RB Omiya Ardija | 1:3 | |
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| 15. Round | 22/10/2016 | RB Omiya Ardija | - | Shonan Bellmare | 3:2 |
Japan