| 21. Round | 07/02/2025 | FC Stade Nyonnais | - | FC Schaffhausen | 0:1 | ||||
| 22. Round | 14/02/2025 | FC Schaffhausen | - | Etoile Carouge FC | 0:0 | ||||
| 23. Round | 21/02/2025 | FC Schaffhausen | - | Neuchâtel Xamax FCS | 2:4 | ||||
| 24. Round | 01/03/2025 | FC Aarau | - | FC Schaffhausen | 3:0 | ||||
| 25. Round | 07/03/2025 | FC Schaffhausen | - | FC Vaduz | 1:1 |  |
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| 26. Round | 15/03/2025 | Stade Lausanne-Ouchy | - | FC Schaffhausen | 0:1 | ||||
| 27. Round | 28/03/2025 | FC Schaffhausen | - | FC Wil 1900 | 1:3 | ||||
| 28. Round | 31/03/2025 | Neuchâtel Xamax FCS | - | FC Schaffhausen | 6:2 | ||||
| 29. Round | 04/04/2025 | FC Thun Berner Oberland | - | FC Schaffhausen | 3:0 | ||||
| 30. Round | 11/04/2025 | FC Schaffhausen | - | Stade Lausanne-Ouchy | 2:3 | ||||
| 31. Round | 18/04/2025 | Etoile Carouge FC | - | FC Schaffhausen | 0:2 | |
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| 32. Round | 25/04/2025 | FC Schaffhausen | - | FC Aarau | 1:1 | |
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| 33. Round | 04/05/2025 | FC Wil 1900 | - | FC Schaffhausen | 3:1 | ||||
| 34. Round | 09/05/2025 | FC Schaffhausen | - | FC Stade Nyonnais | 2:3 |
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