| 15. Round | 12/11/2023 | FK Dukla Praha B | - | Viktoria Plzeň B | 2:2 | ||||
| 17. Round | 10/03/2024 | FK Dukla Praha B | - | Dynamo České Budějovice B | 0:1 | ||||
| 18. Round | 16/03/2024 | FK Motorlet Praha | - | FK Dukla Praha B | 1:4 | ||||
| 19. Round | 24/03/2024 | FK Dukla Praha B | - | Bohemians Praha 1905 B | 3:0 | ||||
| 20. Round | 29/03/2024 | FC Písek | - | FK Dukla Praha B | 0:2 | ||||
| 21. Round | 07/04/2024 | FK Dukla Praha B | - | FK MAS Táborsko B | 1:1 | ||||
| 25. Round | 05/05/2024 | FK Dukla Praha B | - | FK Admira Praha | 1:1 |  |
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| 26. Round | 10/05/2024 | FK Králův Dvůr | - | FK Dukla Praha B | 1:1 | |
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| 27. Round | 19/05/2024 | FK Dukla Praha B | - | FK Loko Vltavín | 0:3 | ||||
| 28. Round | 24/05/2024 | Povltavská FA | - | FK Dukla Praha B | 2:0 | ||||
| 29. Round | 02/06/2024 | FK Dukla Praha B | - | FK Robstav | 1:1 | ||||
| 30. Round | 08/06/2024 | Viktoria Plzeň B | - | FK Dukla Praha B | 3:3 |
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