| 2. Round | 10/08/2008 | Sigma Olomouc | - | Viktoria Plzeň | 2:1 | ||||
| 3. Round | 16/08/2008 | Viktoria Plzeň | - | Slavia Praha | 1:1 |  |
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| 4. Round | 23/08/2008 | Slovan Liberec | - | Viktoria Plzeň | 1:1 | ||||
| 5. Round | 30/08/2008 | Viktoria Plzeň | - | FK Teplice | 1:1 | ||||
| 6. Round | 14/09/2008 | 1. FK Příbram | - | Viktoria Plzeň | 2:2 | ||||
| 10. Round | 19/10/2008 | Viktoria Plzeň | - | AC Sparta Praha | 1:1 | ||||
| 12. Round | 01/11/2008 | Viktoria Plzeň | - | FK Baumit Jablonec | 1:1 | ||||
| 16. Round | 29/11/2008 | Viktoria Plzeň | - | Sigma Olomouc | 4:0 |
Czech Republic