| 1. Round | 01/08/1999 | SK Hradec Králové | - | Slovan Liberec | 1:3 |  |
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| 2. Round | 08/08/1999 | FC Dukla Pribram | - | Slovan Liberec | 1:1 | ||||
| 13. Round | 07/11/1999 | Slovan Liberec | - | FC Boby-sport Brno | 0:1 | ||||
| 14. Round | 19/11/1999 | CU Bohemians Praha | - | Slovan Liberec | 2:0 | ||||
| 15. Round | 28/11/1999 | Slovan Liberec | - | Baník Ostrava | 1:0 | ||||
| 16. Round | 05/12/1999 | Slovan Liberec | - | SK Hradec Králové | 1:0 | ||||
| 17. Round | 19/02/2000 | Slovan Liberec | - | FC Dukla Pribram | 0:0 | ||||
| 18. Round | 27/02/2000 | Chmel Blsany | - | Slovan Liberec | 1:0 | ||||
| 20. Round | 12/03/2000 | Sigma Olomouc | - | Slovan Liberec | 1:1 |  |
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| 21. Round | 19/03/2000 | Slovan Liberec | - | FC Petra Drnovice | 0:0 | ||||
| 22. Round | 25/03/2000 | Viktoria Žižkov | - | Slovan Liberec | 0:0 | ||||
| 23. Round | 02/04/2000 | Slovan Liberec | - | SFC Opava | 1:0 | ||||
| 25. Round | 16/04/2000 | Slovan Liberec | - | FK Teplice | 2:0 |
Czech Republic