| 16. Round | 02/03/2024 | FK Dukla Praha [Youth] | - | Sigma Olomouc [Youth] | 1:1 | ||||
| 17. Round | 09/03/2024 | FK Pardubice [Youth] | - | FK Dukla Praha [Youth] | 1:1 | ||||
| 18. Round | 15/03/2024 | FK Dukla Praha [Youth] | - | FC Zlín [Youth] | 3:3 | ||||
| 19. Round | 17/04/2024 | Dynamo České Budějovice [Youth] | - | FK Dukla Praha [Youth] | 1:0 | ||||
| 28. Round | 25/05/2024 | MFK Karviná [Youth] | - | FK Dukla Praha [Youth] | 3:1 |  |
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| 29. Round | 31/05/2024 | FK Dukla Praha [Youth] | - | Viktoria Plzeň [Youth] | 3:1 | ||||
| 30. Round | 08/06/2024 | 1. FC Slovácko [Youth] | - | FK Dukla Praha [Youth] | 0:1 |
Czech Republic