| 16. Round | 04/03/2023 | Viktoria Plzeň [Youth] | - | FC Zlín [Youth] | 6:1 | ||||
| 18. Round | 17/03/2023 | Slavia Praha [Youth] | - | FC Zlín [Youth] | 1:0 |  |
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| 17. Round | 22/03/2023 | FC Zlín [Youth] | - | FC Zbrojovka Brno [Youth] | 3:1 |  |
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| 19. Round | 25/03/2023 | FC Zlín [Youth] | - | FK Dukla Praha [Youth] | 4:1 | ||||
| 20. Round | 01/04/2023 | MFK Karviná [Youth] | - | FC Zlín [Youth] | 5:2 | |
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| 21. Round | 06/04/2023 | FC Zlín [Youth] | - | FK Příbram [Youth] | 5:1 | ||||
| 22. Round | 15/04/2023 | AC Sparta Praha [Youth] | - | FC Zlín [Youth] | 2:1 | ||||
| 23. Round | 22/04/2023 | FC Hradec Králové [Youth] | - | FC Zlín [Youth] | 0:1 | ||||
| 24. Round | 29/04/2023 | FC Zlín [Youth] | - | Vysočina Jihlava [Youth] | 0:1 | ||||
| 26. Round | 12/05/2023 | FC Zlín [Youth] | - | Banik Ostrava [Youth] | 1:2 | |
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| 27. Round | 20/05/2023 | Dynamo České Budějovice [Youth] | - | FC Zlín [Youth] | 2:3 | |
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| 28. Round | 27/05/2023 | FC Zlín [Youth] | - | Sigma Olomouc [Youth] | 1:5 | ||||
| 29. Round | 03/06/2023 | 1. FC Slovácko [Youth] | - | FC Zlín [Youth] | 2:1 | ||||
| 30. Round | 06/06/2023 | FC Zlín [Youth] | - | FK Mladá Boleslav [Youth] | 4:1 |
Czech Republic