| 18. Round | 25/02/2000 | FC Petra Drnovice | - | CU Bohemians Praha | 3:0 | ||||
| 19. Round | 04/03/2000 | Baník Ostrava | - | FC Petra Drnovice | 3:1 | ||||
| 20. Round | 12/03/2000 | FC Petra Drnovice | - | SK Hradec Králové | 1:0 | ||||
| 25. Round | 16/04/2000 | FC Petra Drnovice | - | FC Dukla Pribram | 2:1 | ||||
| 26. Round | 22/04/2000 | Viktoria Žižkov | - | FC Petra Drnovice | 2:0 | ||||
| 27. Round | 28/04/2000 | FC Petra Drnovice | - | SFC Opava | 1:1 | ||||
| 28. Round | 07/05/2000 | FK Jablonec 97 | - | FC Petra Drnovice | 1:0 | ||||
| 29. Round | 13/05/2000 | FC Petra Drnovice | - | FK Teplice | 1:1 | ||||
| 30. Round | 17/05/2000 | AC Sparta Praha | - | FC Petra Drnovice | 5:0 |  |
Czech Republic