| 1. Round | 21/07/2013 | FK Teplice | - | 1. FC Slovácko | 3:2 |  |
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| 3. Round | 04/08/2013 | FK Baumit Jablonec | - | 1. FC Slovácko | 2:1 | ||||
| 6. Round | 24/08/2013 | 1. FC Slovácko | - | Viktoria Plzeň | 1:3 | ||||
| 9. Round | 20/09/2013 | AC Sparta Praha | - | 1. FC Slovácko | 4:1 | ||||
| 10. Round | 28/09/2013 | 1. FC Slovácko | - | Baník Ostrava | 2:2 | ||||
| 11. Round | 19/10/2013 | 1. FC Slovácko | - | Slovan Liberec | 4:2 | |
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| 12. Round | 26/10/2013 | Sigma Olomouc | - | 1. FC Slovácko | 2:2 | |
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| 15. Round | 24/11/2013 | 1. FC Slovácko | - | Slavia Praha | 3:0 | ||||
| 20. Round | 16/03/2014 | Viktoria Plzeň | - | 1. FC Slovácko | 0:0 | ||||
| 22. Round | 29/03/2014 | 1. FK Příbram | - | 1. FC Slovácko | 3:2 | |
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| 26. Round | 26/04/2014 | 1. FC Slovácko | - | Sigma Olomouc | 3:1 | ||||
| 27. Round | 02/05/2014 | FK Dukla Praha | - | 1. FC Slovácko | 1:1 | ||||
| 28. Round | 10/05/2014 | 1. FC Slovácko | - | 1. SC Znojmo | 2:0 | ||||
| 29. Round | 25/05/2014 | Slavia Praha | - | 1. FC Slovácko | 1:1 | ||||
| 30. Round | 31/05/2014 | 1. FC Slovácko | - | FK Teplice | 0:2 |
Czech Republic