| 1. Round | 29/07/2023 | MFK Skalica | - | Zlaté Moravce | 2:0 |  |
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| 2. Round | 04/08/2023 | MFK Ružomberok | - | MFK Skalica | 2:1 | ||||
| 3. Round | 12/08/2023 | MFK Skalica | - | Slovan Bratislava | 1:2 | ||||
| 4. Round | 18/08/2023 | Dukla Banská Bystrica | - | MFK Skalica | 2:1 | ||||
| 11. Round | 21/10/2023 | AS Trenčín | - | MFK Skalica | 0:0 | ||||
| 12. Round | 28/10/2023 | Zlaté Moravce | - | MFK Skalica | 0:1 | |
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| 13. Round | 04/11/2023 | MFK Skalica | - | MFK Ružomberok | 1:0 | ||||
| 14. Round | 12/11/2023 | Slovan Bratislava | - | MFK Skalica | 1:0 | ||||
| 15. Round | 25/11/2023 | MFK Skalica | - | Dukla Banská Bystrica | 0:3 | ||||
| 16. Round | 03/12/2023 | Spartak Trnava | - | MFK Skalica | 2:0 | ||||
| 17. Round | 09/12/2023 | MFK Zemplín Michalovce | - | MFK Skalica | 1:1 | ||||
| 18. Round | 15/12/2023 | MFK Skalica | - | FK Železiarne Podbrezová | 3:0 | ||||
| 19. Round | 10/02/2024 | FC DAC 1904 | - | MFK Skalica | 1:0 | ||||
| 20. Round | 17/02/2024 | MFK Skalica | - | MŠK Žilina | 1:1 |  |
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| 21. Round | 23/02/2024 | FC Košice | - | MFK Skalica | 2:1 | ||||
| 22. Round | 02/03/2024 | MFK Skalica | - | AS Trenčín | 0:0 |
Czech Republic