| 2. Round | 17/03/2000 | FC Tokyo | - | Avispa Fukuoka | 2:0 | ||||
| 7. Round | 14/04/2000 | FC Tokyo | - | Gamba Osaka | 1:3 | ||||
| 8. Round | 21/04/2000 | Sanfrecce Hiroshima | - | FC Tokyo | 0:1 |  |
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| 9. Round | 28/04/2000 | FC Tokyo | - | Kyoto Purple Sanga | 3:0 | ||||
| 10. Round | 02/05/2000 | Shimizu S-Pulse | - | FC Tokyo | 2:1 | |
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| 11. Round | 05/05/2000 | FC Tokyo | - | Kawasaki Frontale | 2:1 | ||||
| 12. Round | 12/05/2000 | FC Tokyo | - | Cerezo Osaka | 1:2 | |
Japan