| 1. Round | 28/07/2003 | Baník Ostrava | - | Dynamo České Budějovice | 3:1 |  |
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| 2. Round | 04/08/2003 | Tescoma Zlín | - | Dynamo České Budějovice | 2:0 | ||||
| 3. Round | 10/08/2003 | Dynamo České Budějovice | - | 1. FC Brno | 0:2 | ||||
| 5. Round | 23/08/2003 | Dynamo České Budějovice | - | FK Teplice | 1:1 | ||||
| 6. Round | 30/08/2003 | FK Marila Příbram | - | Dynamo České Budějovice | 0:2 | ||||
| 7. Round | 13/09/2003 | Dynamo České Budějovice | - | Sigma Olomouc | 2:1 | ||||
| 8. Round | 20/09/2003 | SFC Opava | - | Dynamo České Budějovice | 1:0 | ||||
| 9. Round | 27/09/2003 | Dynamo České Budějovice | - | FK Jablonec 97 | 3:0 |  |
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| 10. Round | 04/10/2003 | Dynamo České Budějovice | - | 1. FC Synot Stare Mesto | 2:2 | ||||
| 11. Round | 18/10/2003 | Slovan Liberec | - | Dynamo České Budějovice | 2:1 | ||||
| 12. Round | 25/10/2003 | Dynamo České Budějovice | - | Viktoria Žižkov | 2:0 | |
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| 13. Round | 01/11/2003 | Chmel Blsany | - | Dynamo České Budějovice | 2:2 | ||||
| 14. Round | 08/11/2003 | Dynamo České Budějovice | - | Viktoria Plzeň | 1:0 |
Czech Republic