| 18. Round | 22/03/2025 | FK Pardubice [Youth] | - | FC Zlín [Youth] | 2:1 | ||||
| 20. Round | 05/04/2025 | FK Pardubice [Youth] | - | FC Zbrojovka Brno [Youth] | 2:1 | ||||
| 21. Round | 12/04/2025 | Banik Ostrava [Youth] | - | FK Pardubice [Youth] | 3:1 |  |
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| 22. Round | 18/04/2025 | FK Pardubice [Youth] | - | Dynamo České Budějovice [Youth] | 5:2 | |
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| 24. Round | 03/05/2025 | FK Pardubice [Youth] | - | Viktoria Plzeň [Youth] | 0:2 | ||||
| 26. Round | 17/05/2025 | FK Pardubice [Youth] | - | FK Mladá Boleslav [Youth] | 0:1 |  |
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| 27. Round | 24/05/2025 | FK Pardubice [Youth] | - | AC Sparta Praha [Youth] | 1:2 |
Nigeria