| 16. Round | 08/03/2025 | FK Pardubice [Youth B] | - | SFC Opava [Youth B] | 0:0 | ||||
| 17. Round | 14/03/2025 | 1. FC Slovácko [Youth B] | - | FK Pardubice [Youth B] | 4:2 | ||||
| 18. Round | 22/03/2025 | FK Pardubice [Youth B] | - | FC Zlín [Youth B] | 4:0 | ||||
| 19. Round | 29/03/2025 | Sigma Olomouc [Youth B] | - | FK Pardubice [Youth B] | 2:1 |  |
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| 20. Round | 05/04/2025 | FK Pardubice [Youth B] | - | FC Zbrojovka Brno [Youth B] | 0:3 | ||||
| 21. Round | 12/04/2025 | Banik Ostrava [Youth B] | - | FK Pardubice [Youth B] | 4:4 | ||||
| 22. Round | 18/04/2025 | FK Pardubice [Youth B] | - | Dynamo České Budějovice [Youth B] | 3:3 | ||||
| 24. Round | 03/05/2025 | FK Pardubice [Youth B] | - | Viktoria Plzeň [Youth B] | 3:1 |
Czech Republic