| 2. Round | 28/07/2013 | AC Sparta Praha | - | FK Baumit Jablonec | 2:1 | ||||
| 3. Round | 04/08/2013 | FK Baumit Jablonec | - | 1. FC Slovácko | 2:1 | ||||
| 4. Round | 12/08/2013 | Baník Ostrava | - | FK Baumit Jablonec | 0:4 |  |
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| 9. Round | 22/09/2013 | FK Baumit Jablonec | - | Slavia Praha | 2:1 | ||||
| 10. Round | 30/09/2013 | FK Dukla Praha | - | FK Baumit Jablonec | 1:1 | ||||
| 12. Round | 26/10/2013 | Vysočina Jihlava | - | FK Baumit Jablonec | 3:2 | ||||
| 13. Round | 01/11/2013 | Viktoria Plzeň | - | FK Baumit Jablonec | 6:1 | ||||
| 14. Round | 10/11/2013 | FK Baumit Jablonec | - | 1. FK Příbram | 6:0 | ||||
| 15. Round | 24/11/2013 | Bohemians Praha 1905 | - | FK Baumit Jablonec | 0:1 | ||||
| 16. Round | 30/11/2013 | FK Baumit Jablonec | - | AC Sparta Praha | 2:3 |
Serbia