| 1. Round | 15/02/2025 | RB Omiya Ardija | - | Montedio Yamagata | 2:1 | ||||
| 2. Round | 23/02/2025 | Mito HollyHock | - | Montedio Yamagata | 1:0 | ||||
| 3. Round | 01/03/2025 | JEF United Chiba | - | Montedio Yamagata | 3:2 | ||||
| 6. Round | 23/03/2025 | Montedio Yamagata | - | Tokushima Vortis | 0:0 | ||||
| 8. Round | 05/04/2025 | Montedio Yamagata | - | Júbilo Iwata | 0:0 | ||||
| 9. Round | 12/04/2025 | Iwaki FC | - | Montedio Yamagata | 0:1 | ||||
| 10. Round | 19/04/2025 | Montedio Yamagata | - | Ehime FC | 2:3 |  |
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| 11. Round | 25/04/2025 | Sagan Tosu | - | Montedio Yamagata | 2:1 | ||||
| 12. Round | 29/04/2025 | Kataller Toyama | - | Montedio Yamagata | 0:0 |  |
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| 13. Round | 03/05/2025 | Montedio Yamagata | - | Hokkaido Consadole Sapporo | 0:1 | ||||
| 14. Round | 06/05/2025 | Montedio Yamagata | - | Oita Trinita | 3:0 | |
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| 15. Round | 11/05/2025 | V-Varen Nagasaki | - | Montedio Yamagata | 1:1 | ||||
| 16. Round | 18/05/2025 | Renofa Yamaguchi | - | Montedio Yamagata | 1:0 | ||||
| 17. Round | 25/05/2025 | Montedio Yamagata | - | Ventforet Kofu | 0:4 | ||||
| 18. Round | 31/05/2025 | Fujieda MyFC | - | Montedio Yamagata | 2:1 |
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