| Challenge League | Matches | W | D | L |  |
 |
 |
| home | 9 | 4 | 3 | 2 | 17 | 1 | - |
| away | 5 | - | 3 | 2 | 12 | 1 | - |
| overall | 14 | 4 | 6 | 4 | 29 | 2 | - |
| Cup | Matches | W | D | L | |
|
|
| home | 2 | - | - | 2 | 4 | - | - |
| away | - | - | - | - | - | - | - |
| overall | 2 | - | - | 2 | 4 | - | - |
| Challenge League | Home | - | Guest | |
|
|
Results |
| 25/08/08 | FC Wil 1900 | - | FC Lugano | 2 | 1 | - | 3:4 |
| 28/03/09 | FC Gossau | - | FC Wil 1900 | 2 | - | - | 0:0 |
| 26/10/09 | FC Vaduz | - | FC Wil 1900 | 2 | - | - | 3:2 |
| 10/03/10 | FC Wil 1900 | - | FC Vaduz | 3 | - | - | 1:1 |
| 21/08/11 | FC Wil 1900 | - | FC St. Gallen | 4 | - | - | 2:2 |
| 05/04/14 | FC Wohlen | - | FC Wil 1900 | 2 | - | - | 2:2 |
| 17/04/14 | FC Winterthur | - | FC Wil 1900 | 2 | - | - | 0:0 |
| 10/05/14 | FC Wil 1900 | - | FC Vaduz | - | - | - | 2:0 |
| 28/09/15 | FC Wil 1900 | - | FC Winterthur | 2 | - | - | 0:0 |
| 28/11/15 | FC Wil 1900 | - | FC Schaffhausen | 3 | - | - | 3:2 |
| 20/02/16 | FC Lausanne-Sport | - | FC Wil 1900 | 4 | 1 | - | 2:1 |
| 18/02/17 | FC Wil 1900 | - | FC Zürich | - | - | - | 0:4 |
| 27/10/19 | FC Wil 1900 | - | FC Aarau | 2 | - | - | 3:0 |
| 23/01/21 | FC Wil 1900 | - | FC Aarau | 1 | - | - | 3:1 |
| Cup | Home | - | Guest | |
|
|
Results |
| 17/09/17 | FC Wil 1900 | - | FC Thun Berner Oberland | 2 | - | - | 0:3 |
| 14/09/19 | FC Wil 1900 | - | FC Zürich | 2 | - | - | 1:2 |
Switzerland