| Super League | Matches | W | D | L |  |
 |
 |
| home | 1 | - | - | 1 | 1 | - | - |
| away | 4 | 1 | 2 | 1 | 8 | 1 | - |
| overall | 5 | 1 | 2 | 2 | 9 | 1 | - |
| Challenge League | Matches | W | D | L | |
|
|
| home | 1 | 1 | - | - | 2 | - | - |
| away | 3 | 1 | 1 | 1 | 6 | 1 | 1 |
| overall | 4 | 2 | 1 | 1 | 8 | 1 | 1 |
| Super League | Home | - | Guest | |
|
|
Results |
| 22/07/06 | FC Basel 1893 | - | FC Schaffhausen | 2 | - | - | 3:0 |
| 18/09/06 | FC Schaffhausen | - | FC Sion | 1 | - | - | 1:3 |
| 21/10/06 | FC Zürich | - | FC Schaffhausen | 3 | - | - | 0:1 |
| 10/03/07 | FC Basel 1893 | - | FC Schaffhausen | 1 | 1 | - | 0:0 |
| 16/05/07 | FC St. Gallen | - | FC Schaffhausen | 2 | - | - | 1:1 |
| Challenge League | Home | - | Guest | |
|
|
Results |
| 28/05/09 | FC Concordia Basel | - | FC Schaffhausen | 2 | 1 | - | 3:0 |
| 15/08/09 | FC Schaffhausen | - | FC Wil 1900 | 2 | - | - | 3:2 |
| 24/04/10 | FC Biel/Bienne | - | FC Schaffhausen | 1 | - | 1 | 0:0 |
| 20/03/11 | Yverdon Sport FC | - | FC Schaffhausen | 3 | - | - | 0:4 |
Switzerland