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| 05/11/2012 | 07:00 | Metallurg-Kuzbass Novokuznetsk | - | Enisey Krasnoyarsk | 1:0 (1:0) | |
| 10:00 | Torpedo Moskva | - | FK Neftekhimik | 2:3 (1:1) | ||
| 12:00 | Spartak Nalchik | - | Shinnik Yaroslavl | 3:2 (1:2) | ||
| 13:00 | FC Salyut Belgorod | - | FK Ufa | 1:1 (0:0) | ||
| 13:00 | Rotor Volgograd | - | Baltika Kaliningrad | 3:0 (0:0) | ||
| 06/11/2012 | 08:00 | SKA-Energiya Khabarovsk | - | FK Ural | 0:2 (0:1) | |
| 12:00 | FK Tom Tomsk | - | FK Khimki | 3:2 (2:1) | ||
| 12:00 | Sibir Novosibirsk | - | FC Petrotrest | 2:0 (1:0) |
| » Tables | Home | Away | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Tom Tomsk | 19 | 14 | 3 | 2 | 39:21 | 18 | 45 |
| 2 |
|
FK Ural | 19 | 12 | 5 | 2 | 43:11 | 32 | 41 |
| 3 |
|
FK Neftekhimik | 19 | 9 | 5 | 5 | 28:21 | 7 | 32 |
| 4 |
|
SKA-Energiya Khabarovsk | 19 | 8 | 8 | 3 | 22:15 | 7 | 32 |
| 5 |
|
Baltika Kaliningrad | 19 | 9 | 5 | 5 | 21:18 | 3 | 32 |
| 6 |
|
Rotor Volgograd | 19 | 9 | 4 | 6 | 18:13 | 5 | 31 |
| 7 |
|
Spartak Nalchik | 18 | 9 | 3 | 6 | 17:18 | -1 | 30 |
| 8 |
|
Sibir Novosibirsk | 19 | 8 | 4 | 7 | 21:21 | 0 | 28 |
| 9 |
|
FK Ufa | 19 | 7 | 6 | 6 | 21:22 | -1 | 27 |
| 10 |
|
FC Petrotrest | 19 | 6 | 3 | 10 | 19:27 | -8 | 21 |
| 11 |
|
Enisey Krasnoyarsk | 19 | 5 | 5 | 9 | 16:20 | -4 | 20 |
| 12 |
|
Torpedo Moskva | 18 | 4 | 8 | 6 | 18:23 | -5 | 20 |
| 13 |
|
Metallurg-Kuzbass Novokuznetsk | 19 | 5 | 3 | 11 | 10:22 | -12 | 18 |
| 14 |
|
FC Volgar-Gazprom | 18 | 3 | 8 | 7 | 12:20 | -8 | 17 |
| 15 |
|
Shinnik Yaroslavl | 19 | 3 | 6 | 10 | 15:25 | -10 | 15 |
| 16 |
|
FC Salyut Belgorod | 19 | 3 | 6 | 10 | 11:22 | -11 | 15 |
| 17 |
|
FK Khimki | 19 | 3 | 4 | 12 | 15:27 | -12 | 13 |
| Promotion | |
| Playoffs | |
| Relegation |
