| Challenge League | M. | W | D | L | goals | |||
| at home | 2 | 2 | 0 | 0 | 8 | : | 1 | |
| Away | 3 | 2 | 1 | 0 | 3 | : | 1 | |
| ∑ | 5 | 4 | 1 | 0 | 11 | : | 2 | |
| Cup | M. | W | D | L | goals | |||
| Away | 2 | 2 | 0 | 0 | 7 | : | 0 | |
| ∑ | 2 | 2 | 0 | 0 | 7 | : | 0 | |
| overall | M. | W | D | L | goals | |||
| at home | 2 | 2 | 0 | 0 | 8 | : | 1 | |
| Away | 5 | 4 | 1 | 0 | 10 | : | 1 | |
| Neutral Place | 0 | 0 | 0 | 0 | 0 | : | 0 | |
| ∑ | 7 | 6 | 1 | 0 | 18 | : | 2 | |
| Cup | |||||
| 2012/2013 | 2. Round | FC Baden | - | FC Schaffhausen | 0:5 (0:2) |
| 2005/2006 | 2. Round | FC Baden | - | FC Schaffhausen | 0:2 |
|
For games that were decided on penalties the score after 120 minutes will be included in the ranking |
Switzerland 
![FC Schaffhausen [U18]](https://s.hs-data.com/bilder/wappen/mini/40231.gif?fallback=png "FC Schaffhausen [U18]"){kind=small}
![FC Schaffhausen [U16]](https://s.hs-data.com/bilder/wappen/mini/43721.gif?fallback=png "FC Schaffhausen [U16]"){kind=small}
![FC Schaffhausen [Youth B]](https://s.hs-data.com/bilder/wappen/mini/39576.gif?fallback=png "FC Schaffhausen [Youth B]"){kind=small}
![FC Schaffhausen [Youth C]](https://s.hs-data.com/bilder/wappen/mini/26566.gif?fallback=png "FC Schaffhausen [Youth C]"){kind=small}