| 2. fotbalová liga | M. | W | D | L | goals | |||
| at home | 1 | 1 | 0 | 0 | 3 | : | 0 | |
| Away | 1 | 1 | 0 | 0 | 2 | : | 0 | |
| ∑ | 2 | 2 | 0 | 0 | 5 | : | 0 | |
| Pohár FAČR | M. | W | D | L | goals | |||
| Away | 2 | 1 | 0 | 0 | 4 | : | 1 | |
| ∑ | 2 | 1 | 0 | 0 | 4 | : | 1 | |
| overall | M. | W | D | L | goals | |||
| at home | 1 | 1 | 0 | 0 | 3 | : | 0 | |
| Away | 3 | 2 | 0 | 0 | 6 | : | 1 | |
| Neutral Place | 0 | 0 | 0 | 0 | 0 | : | 0 | |
| ∑ | 4 | 3 | 0 | 0 | 9 | : | 1 | |
| 2. fotbalová liga | |||||
| 2024/2025 | 17. Round | FC Zlín | - | 1. SK Prostějov | 3:0 (1:0) |
| 2024/2025 | 3. Round | 1. SK Prostějov | - | FC Zlín | 0:2 (0:1) |
| Pohár FAČR | |||||
| 2015/2016 | 3. Round | 1. SK Prostějov | - | FC Fastav Zlín | 1:4 (1:2) |
| 2013/2014 | 2. Round | 1. SK Prostějov | - | FC Fastav Zlín | 0:3 pso |
|
For games that were decided on penalties the score after 120 minutes will be included in the ranking |
Czech Republic 
![FC Zlín [Women]](https://s.hs-data.com/bilder/wappen/mini/42120.gif?fallback=png "FC Zlín [Women]"){kind=small}
![FC Zlín [Youth]](https://s.hs-data.com/bilder/wappen/mini/22875.gif?fallback=png "FC Zlín [Youth]"){kind=small}
![FC Zlín [Youth B]](https://s.hs-data.com/bilder/wappen/mini/23798.gif?fallback=png "FC Zlín [Youth B]"){kind=small}
![FC Zlín [Youth C]](https://s.hs-data.com/bilder/wappen/mini/41534.gif?fallback=png "FC Zlín [Youth C]"){kind=small}