| 23. Round | 30/01/2016 | Erzgebirge Aue | - | VfB Stuttgart II | 1:0 | ||||
| 27. Round | 26/02/2016 | VfB Stuttgart II | - | Hallescher FC | 1:1 | ||||
| 28. Round | 01/03/2016 | Werder Bremen II | - | VfB Stuttgart II | 0:1 | ||||
| 29. Round | 06/03/2016 | VfB Stuttgart II | - | Chemnitzer FC | 1:1 |  |
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| 30. Round | 12/03/2016 | Fortuna Köln | - | VfB Stuttgart II | 1:3 | ||||
| 31. Round | 18/03/2016 | VfB Stuttgart II | - | VfL Osnabrück | 0:1 | ||||
| 32. Round | 02/04/2016 | Stuttgarter Kickers | - | VfB Stuttgart II | 4:1 | ||||
| 33. Round | 09/04/2016 | VfB Stuttgart II | - | VfR Aalen | 1:1 | ||||
| 34. Round | 16/04/2016 | Hansa Rostock | - | VfB Stuttgart II | 2:0 | ||||
| 35. Round | 22/04/2016 | VfB Stuttgart II | - | Energie Cottbus | 0:1 | ||||
| 37. Round | 07/05/2016 | VfB Stuttgart II | - | 1. FC Magdeburg | 0:1 | ||||
| 38. Round | 14/05/2016 | SV Wehen Wiesbaden | - | VfB Stuttgart II | 3:1 |
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