| 39. Round | 24/03/2012 | Bradford City | - | Gillingham FC | 2:2 | ||||
| 30. Round | 27/03/2012 | Burton Albion | - | Gillingham FC | 1:0 | ||||
| 40. Round | 31/03/2012 | Gillingham FC | - | Macclesfield Town | 2:0 | ||||
| 41. Round | 06/04/2012 | Bristol Rovers | - | Gillingham FC | 2:2 | ||||
| 42. Round | 09/04/2012 | Gillingham FC | - | Dagenham & Redbridge | 1:2 |  |
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| 43. Round | 14/04/2012 | Oxford United | - | Gillingham FC | 0:0 | ||||
| 44. Round | 21/04/2012 | Gillingham FC | - | Swindon Town | 3:1 | ||||
| 45. Round | 28/04/2012 | Northampton Town | - | Gillingham FC | 1:1 | ||||
| 46. Round | 05/05/2012 | Gillingham FC | - | Morecambe FC | 2:0 |
England