| Challenge League | Matches | W | D | L |  |
 |
 |
| home | 4 | 1 | 2 | 1 | 6 | - | - |
| away | 8 | 2 | - | 6 | 18 | 1 | - |
| overall | 12 | 3 | 2 | 7 | 24 | 1 | - |
| Cup | Matches | W | D | L | |
|
|
| home | 1 | - | - | 1 | 5 | - | - |
| away | - | - | - | - | - | - | - |
| overall | 1 | - | - | 1 | 5 | - | - |
| Challenge League | Home | - | Guest | |
|
|
Results |
| 02/04/16 | FC Winterthur | - | FC Wil 1900 | 2 | - | - | 1:2 |
| 12/09/16 | FC Winterthur | - | FC Wil 1900 | 2 | 1 | - | 3:0 |
| 07/11/16 | FC Wil 1900 | - | FC Chiasso | - | - | - | 0:0 |
| 05/08/17 | FC Wil 1900 | - | FC Wohlen | 2 | - | - | 3:1 |
| 21/05/18 | Neuchâtel Xamax FCS | - | FC Wil 1900 | 1 | - | - | 6:3 |
| 26/01/20 | FC Vaduz | - | FC Wil 1900 | 1 | - | - | 2:1 |
| 22/02/20 | FC Chiasso | - | FC Wil 1900 | 2 | - | - | 2:0 |
| 19/06/20 | FC Wil 1900 | - | FC Lausanne-Sport | 1 | - | - | 1:1 |
| 15/12/20 | FC Schaffhausen | - | FC Wil 1900 | 2 | - | - | 1:0 |
| 29/09/23 | FC Wil 1900 | - | FC Aarau | 3 | - | - | 0:2 |
| 18/10/24 | FC Stade Nyonnais | - | FC Wil 1900 | 7 | - | - | 3:1 |
| 23/05/25 | Neuchâtel Xamax FCS | - | FC Wil 1900 | 1 | - | - | 2:3 |
| Cup | Home | - | Guest | |
|
|
Results |
| 15/09/23 | FC Wil 1900 | - | Stade Lausanne-Ouchy | 5 | - | - | 3:4 pso |
Switzerland