| 3. Liga | Matches | W | D | L |  |
 |
 |
| home | 3 | 1 | 1 | 1 | 5 | - | - |
| away | 2 | 1 | 1 | - | 6 | - | - |
| overall | 5 | 2 | 2 | 1 | 11 | - | - |
| Aufstiegsrunde 3. Liga | Matches | W | D | L | |
|
|
| home | - | - | - | - | - | - | - |
| away | 1 | 1 | - | - | 4 | - | - |
| overall | 1 | 1 | - | - | 4 | - | - |
| 3. Liga | Home | - | Guest | |
|
|
Results |
| 03/04/10 | FC Ingolstadt 04 | - | FC Carl Zeiss Jena | 2 | - | - | 2:2 |
| 20/11/10 | FC Carl Zeiss Jena | - | Kickers Offenbach | 1 | - | - | 1:0 |
| 29/07/17 | FC Carl Zeiss Jena | - | Fortuna Köln | 1 | - | - | 0:2 |
| 04/08/18 | Preußen Münster | - | FC Carl Zeiss Jena | 4 | - | - | 1:2 |
| 03/11/18 | FC Carl Zeiss Jena | - | Hansa Rostock | 3 | - | - | 1:1 |
| Aufstiegsrunde 3. Liga | Home | - | Guest | |
|
|
Results |
| 28/05/17 | Viktoria Köln | - | FC Carl Zeiss Jena | 4 | - | - | 2:3 |
Germany