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| 28/04/2012 | 09:15 | AC Sparta Praha B | - | Bohemians Praha | 3:1 (1:1) | |
| 09:15 | FK Ústí nad Labem | - | FK Čáslav | 2:0 (1:0) | ||
| 17:00 | SFC Opava | - | FK Baník Most | 2:2 (2:1) | ||
| 18:00 | Tescoma Zlín | - | FK Baník Sokolov | 1:1 (1:1) | ||
| 29/04/2012 | 16:00 | MFK Karviná | - | Vysočina Jihlava | 1:1 (0:0) | |
| 16:00 | FK Varnsdorf | - | Zbrojovka Brno | 1:2 (0:0) | ||
| 16:00 | 1. SC Znojmo | - | FK Fotbal Třinec | 0:0 (0:0) | ||
| 01/05/2012 | 16:00 | FC Graffin Vlašim | - | FK MAS Táborsko | 3:1 (1:0) |
| » Tables | Home | Away | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FK Ústí nad Labem | 25 | 16 | 3 | 6 | 46:30 | 16 | 51 |
| 2 |
|
Vysočina Jihlava | 25 | 13 | 6 | 6 | 36:26 | 10 | 45 |
| 3 |
|
Bohemians Praha | 25 | 13 | 5 | 7 | 40:25 | 15 | 44 |
| 4 |
|
FK Baník Sokolov | 25 | 12 | 6 | 7 | 35:27 | 8 | 42 |
| 5 |
|
Zbrojovka Brno | 25 | 11 | 8 | 6 | 33:26 | 7 | 41 |
| 6 |
|
MFK Karviná | 25 | 12 | 4 | 9 | 35:31 | 4 | 40 |
| 7 |
|
FK Varnsdorf | 25 | 9 | 9 | 7 | 29:31 | -2 | 36 |
| 8 |
|
Tescoma Zlín | 25 | 9 | 6 | 10 | 25:27 | -2 | 33 |
| 9 |
|
FK MAS Táborsko | 25 | 10 | 2 | 13 | 33:38 | -5 | 32 |
| 10 |
|
SFC Opava | 25 | 8 | 7 | 10 | 33:32 | 1 | 31 |
| 11 |
|
1. SC Znojmo | 25 | 8 | 7 | 10 | 26:31 | -5 | 31 |
| 12 |
|
FK Baník Most | 25 | 8 | 5 | 12 | 25:39 | -14 | 29 |
| 13 |
|
FK Čáslav | 25 | 7 | 8 | 10 | 24:32 | -8 | 29 |
| 14 |
|
FC Graffin Vlašim | 25 | 7 | 7 | 11 | 31:34 | -3 | 28 |
| 15 |
|
FK Fotbal Třinec | 25 | 6 | 8 | 11 | 26:33 | -7 | 26 |
| 16 |
|
AC Sparta Praha B | 25 | 5 | 1 | 19 | 29:44 | -15 | 16 |
| Promotion | |
| Relegation |
