| 6. Round | 07/10/2023 | Racing Besançon | - | FC Bourg-Péronnas | 2:1 | ||||
| 11. Round | 02/12/2023 | FC Bourg-Péronnas | - | ASC Biesheim | 3:2 | ||||
| 8. Round | 09/12/2023 | UF Mâconnais | - | FC Bourg-Péronnas | 1:2 | ||||
| 12. Round | 15/12/2023 | ES Wasquehal | - | FC Bourg-Péronnas | 1:1 | ||||
| 13. Round | 13/01/2024 | FC Bourg-Péronnas | - | AJ Auxerre B | 0:1 |  |
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| 14. Round | 20/01/2024 | AS Furiani-Agliani | - | FC Bourg-Péronnas | 1:0 | ||||
| 15. Round | 03/02/2024 | FC Bourg-Péronnas | - | FC Fleury 91 | 0:4 | ||||
| 16. Round | 17/02/2024 | FC Bourg-Péronnas | - | SR Colmar | 1:0 | |
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| 17. Round | 24/02/2024 | US Créteil-Lusitanos | - | FC Bourg-Péronnas | 1:1 |
France