| 3. Round | 13/08/2012 | RC Lens | - | Havre AC | 1:0 | ||||
| 4. Round | 17/08/2012 | Havre AC | - | Gazélec FC Ajaccio | 2:1 | ||||
| 5. Round | 25/08/2012 | Dijon FCO | - | Havre AC | 2:2 |  |
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| 6. Round | 31/08/2012 | Havre AC | - | AS Monaco | 2:1 | ||||
| 7. Round | 17/09/2012 | Angers SCO | - | Havre AC | 3:1 | ||||
| 8. Round | 21/09/2012 | Havre AC | - | FC Nantes | 1:1 | ||||
| 9. Round | 28/09/2012 | LB Châteauroux | - | Havre AC | 1:1 | ||||
| 10. Round | 05/10/2012 | Havre AC | - | AJ Auxerre | 2:1 | ||||
| 11. Round | 19/10/2012 | Chamois Niortais | - | Havre AC | 0:0 | ||||
| 12. Round | 26/10/2012 | Havre AC | - | Nîmes Olympique | 1:1 | ||||
| 14. Round | 09/11/2012 | Havre AC | - | Clermont Foot Auvergne 63 | 1:3 | ||||
| 15. Round | 23/11/2012 | CS Sedan | - | Havre AC | 1:2 |  |
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| 16. Round | 30/11/2012 | Havre AC | - | Tours FC | 3:0 | ||||
| 17. Round | 11/12/2012 | FC Istres | - | Havre AC | 3:0 | ||||
| 19. Round | 21/12/2012 | Stade Lavallois | - | Havre AC | 1:2 | ||||
| 21. Round | 18/01/2013 | Havre AC | - | RC Lens | 2:2 | ||||
| 30. Round | 01/04/2013 | Nîmes Olympique | - | Havre AC | 0:1 | ||||
| 32. Round | 12/04/2013 | Clermont Foot Auvergne 63 | - | Havre AC | 1:1 | ||||
| 38. Round | 24/05/2013 | AC Arles-Avignon | - | Havre AC | 1:1 |
France