| 17. Round | 22/02/2009 | SK Kladno | - | Bohemians Praha | 1:0 | ||||
| 18. Round | 01/03/2009 | Bohemians Praha | - | Slavia Praha | 0:0 |  |
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| 19. Round | 08/03/2009 | 1. FC Brno | - | Bohemians Praha | 0:0 | |
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| 21. Round | 21/03/2009 | Slovan Liberec | - | Bohemians Praha | 2:1 | ||||
| 22. Round | 05/04/2009 | Bohemians Praha | - | 1. FK Příbram | 1:0 | |
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| 23. Round | 12/04/2009 | FK Teplice | - | Bohemians Praha | 1:0 | ||||
| 25. Round | 25/04/2009 | Viktoria Plzeň | - | Bohemians Praha | 3:1 | ||||
| 27. Round | 10/05/2009 | Bohemians Praha | - | FK Baumit Jablonec | 4:3 | ||||
| 28. Round | 17/05/2009 | AC Sparta Praha | - | Bohemians Praha | 1:0 | ||||
| 29. Round | 23/05/2009 | Bohemians Praha | - | FK Mladá Boleslav | 2:1 |
Czech Republic