| 1. Round | 03/09/1988 | Real Murcia | - | CD Málaga | 1:0 | ||||
| 2. Round | 09/09/1988 | CD Málaga | - | RC Celta | 2:2 | ||||
| 3. Round | 17/09/1988 | CD Logroñés | - | CD Málaga | 1:0 | ||||
| 4. Round | 24/09/1988 | CD Málaga | - | Athletic Club | 1:1 | ||||
| 5. Round | 02/10/1988 | Sevilla FC | - | CD Málaga | 1:1 |  |
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| 6. Round | 09/10/1988 | CD Málaga | - | Atlético Madrid | 1:2 | ||||
| 7. Round | 16/10/1988 | Cádiz CF | - | CD Málaga | 0:1 | ||||
| 8. Round | 23/10/1988 | CD Málaga | - | Real Oviedo | 1:1 | ||||
| 12. Round | 26/11/1988 | CA Osasuna | - | CD Málaga | 1:0 | ||||
| 14. Round | 03/12/1988 | Real Sociedad | - | CD Málaga | 2:2 | ||||
| 21. Round | 11/02/1989 | RC Celta | - | CD Málaga | 2:0 | ||||
| 23. Round | 25/02/1989 | Athletic Club | - | CD Málaga | 3:1 |
Spain