| 1. Round | 26/08/2023 | CD Castellón | - | Málaga CF | 2:1 | ||||
| 2. Round | 02/09/2023 | Málaga CF | - | Atlético Madrid B | 2:1 | ||||
| 3. Round | 10/09/2023 | Atlético Baleares | - | Málaga CF | 1:2 | ||||
| 4. Round | 16/09/2023 | Málaga CF | - | Recreativo Granada | 3:0 | ||||
| 5. Round | 24/09/2023 | Linares Deportivo | - | Málaga CF | 0:1 | ||||
| 6. Round | 01/10/2023 | Málaga CF | - | San Fernando CD | 1:0 | ||||
| 7. Round | 08/10/2023 | Recreativo Huelva | - | Málaga CF | 1:1 | ||||
| 8. Round | 12/10/2023 | Málaga CF | - | UD Melilla | 1:0 | ||||
| 18. Round | 02/01/2024 | CF Intercity | - | Málaga CF | 2:2 | ||||
| 19. Round | 14/01/2024 | AD Ceuta FC | - | Málaga CF | 3:2 | ||||
| 20. Round | 21/01/2024 | Málaga CF | - | CD Castellón | 0:1 | ||||
| 28. Round | 17/03/2024 | Málaga CF | - | CF Intercity | 1:0 | ||||
| 29. Round | 23/03/2024 | Algeciras CF | - | Málaga CF | 0:0 | ||||
| 32. Round | 14/04/2024 | Atlético Madrid B | - | Málaga CF | 0:1 | ||||
| 37. Round | 18/05/2024 | Málaga CF | - | Antequera CF | 3:0 |  |
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| 38. Round | 25/05/2024 | Real Madrid Castilla | - | Málaga CF | 1:2 |
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