| Primera División | Matches | W | D | L |  |
 |
 |
| home | 5 | 4 | 1 | - | 7 | - | - |
| away | 1 | 1 | - | - | 5 | - | - |
| overall | 6 | 5 | 1 | - | 12 | - | - |
| Segunda División | Matches | W | D | L | |
|
|
| home | 2 | 2 | - | - | 2 | - | - |
| away | 1 | - | - | 1 | 1 | - | - |
| overall | 3 | 2 | - | 1 | 3 | - | - |
| Copa Bicentenario | Matches | W | D | L | |
|
|
| home | - | - | - | - | - | - | - |
| away | 1 | 1 | - | - | 1 | - | - |
| overall | 1 | 1 | - | - | 1 | - | - |
| Primera División | Home | - | Guest | |
|
|
Results |
| 14/09/20 | Universidad San Martín | - | Cusco FC | 5 | - | - | 1:2 |
| 20/02/23 | Cusco FC | - | Alianza Atlético | 3 | - | - | 2:1 |
| 27/05/23 | Cusco FC | - | Sport Boys | 2 | - | - | 2:1 |
| 21/09/23 | Cusco FC | - | Atlético Grau | - | - | - | 0:0 |
| 18/02/24 | Cusco FC | - | Deportivo Garcilaso | 2 | - | - | 1:0 |
| 11/05/24 | Cusco FC | - | Mannucci | - | - | - | 3:0 |
| Segunda División | Home | - | Guest | |
|
|
Results |
| 03/04/22 | Unión Comercio | - | Cusco FC | 1 | - | - | 1:0 |
| 30/04/22 | Cusco FC | - | Pirata | 2 | - | - | 2:0 |
| 23/07/22 | Cusco FC | - | Chavelines Juniors | - | - | - | 3:0 dec. |
| Copa Bicentenario | Home | - | Guest | |
|
|
Results |
| 11/06/21 | Deportivo Binacional | - | Cusco FC | 1 | - | - | 3:5 pso |
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