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| 1st(1st leg) | South China AA | - | Johor Darul Ta’zim | 1:1 (0:1) | ||
| 2nd (2nd leg) | Johor Darul Ta’zim | - | South China AA | 2:1 (0:0) | ||
| 1st(1st leg): 13/09/2016 13:00 | 2nd (2nd leg): 20/09/2016 13:45 | Winner: Johor Darul Ta’zim | ||||
| 1st(1st leg) | Al Quwa Al Jawiya | - | Al Jaish | 1:1 (0:0) | ||
| 2nd (2nd leg) | Al Jaish | - | Al Quwa Al Jawiya | 0:4 (0:0) | ||
| 1st(1st leg): 13/09/2016 17:00 | 2nd (2nd leg): 20/09/2016 17:00 | Winner: Al Quwa Al Jawiya | ||||
| 1st(1st leg) | Bengaluru FC | - | Tampines Rovers | 1:0 (1:0) | ||
| 2nd (2nd leg) | Tampines Rovers | - | Bengaluru FC | 0:0 (0:0) | ||
| 1st(1st leg): 14/09/2016 11:30 | 2nd (2nd leg): 21/09/2016 12:30 | Winner: Bengaluru FC | ||||
| 1st(1st leg) | Al Ahed | - | Al Muharraq | 1:0 (1:0) | ||
| 2nd (2nd leg) | Al Muharraq | - | Al Ahed | 0:2 (0:1) | ||
| 1st(1st leg): 14/09/2016 13:30 | 2nd (2nd leg): 21/09/2016 16:00 | Winner: Al Ahed | ||||
