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| 16/03/2013 | 09:15 | FK Pardubice | - | SFC Opava | 1:2 (1:0) | |
| 09:15 | Bohemians Praha | - | FK Varnsdorf | 0:0 (0:0) | ||
| 09:15 | FK Ústí nad Labem | - | FK Čáslav | 2:1 (2:1) | ||
| 09:15 | FK Baník Sokolov | - | FC Graffin Vlašim | 2:0 (1:0) | ||
| 13:30 | FK Baník Most | - | Viktoria Žižkov | 2:0 (1:0) | ||
| 14:00 | 1. HFK Olomouc | - | FK MAS Táborsko | 2:0 (0:0) | ||
| 16:00 | FC Fastav Zlín | - | 1. SC Znojmo | 3:1 (1:0) | ||
| 17/03/2013 | 14:00 | MFK Karviná | - | Bohemians 1905 | 0:0 (0:0) |
| » Tables | Home | Away | First round | Second round |
| # | Team | M. | W | D | L | goals | Dif. | Pt. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Bohemians 1905 | 19 | 10 | 6 | 3 | 31:15 | 16 | 36 |
| 2 |
|
1. HFK Olomouc | 19 | 11 | 3 | 5 | 30:21 | 9 | 36 |
| 3 |
|
1. SC Znojmo | 19 | 10 | 4 | 5 | 26:19 | 7 | 34 |
| 4 |
|
FK Varnsdorf | 19 | 10 | 3 | 6 | 33:21 | 12 | 33 |
| 5 |
|
Viktoria Žižkov | 19 | 9 | 5 | 5 | 25:16 | 9 | 32 |
| 6 |
|
FC Fastav Zlín | 19 | 9 | 3 | 7 | 29:22 | 7 | 30 |
| 7 |
|
FK Baník Sokolov | 19 | 8 | 6 | 5 | 24:18 | 6 | 30 |
| 8 |
|
FK Pardubice | 19 | 8 | 3 | 8 | 30:22 | 8 | 27 |
| 9 |
|
FK Ústí nad Labem | 19 | 7 | 5 | 7 | 20:28 | -8 | 26 |
| 10 |
|
Bohemians Praha | 19 | 3 | 12 | 4 | 16:17 | -1 | 21 |
| 11 |
|
MFK Karviná | 19 | 4 | 8 | 7 | 18:27 | -9 | 20 |
| 12 |
|
FK MAS Táborsko | 19 | 4 | 7 | 8 | 16:24 | -8 | 19 |
| 13 |
|
FC Graffin Vlašim | 19 | 5 | 4 | 10 | 21:34 | -13 | 19 |
| 14 |
|
FK Baník Most | 19 | 4 | 6 | 9 | 21:33 | -12 | 18 |
| 15 |
|
FK Čáslav | 19 | 3 | 7 | 9 | 12:21 | -9 | 16 |
| 16 |
|
SFC Opava | 19 | 3 | 6 | 10 | 18:32 | -14 | 15 |
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| Relegation |
