| 6. Round | 03/09/2016 | Notts County | - | Grimsby Town | 2:2 |  |
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| 7. Round | 10/09/2016 | Notts County | - | Accrington Stanley | 0:2 | ||||
| 8. Round | 17/09/2016 | Cheltenham Town | - | Notts County | 2:3 | ||||
| 9. Round | 24/09/2016 | Notts County | - | Leyton Orient | 3:1 | |
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| 10. Round | 27/09/2016 | Exeter City | - | Notts County | 0:2 |  |
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| 12. Round | 08/10/2016 | Mansfield Town | - | Notts County | 3:1 | ||||
| 11. Round | 11/10/2016 | Notts County | - | Morecambe FC | 1:2 | ||||
| 13. Round | 15/10/2016 | Notts County | - | Crewe Alexandra | 1:1 | ||||
| 14. Round | 22/10/2016 | Portsmouth FC | - | Notts County | 1:2 |  |
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| 15. Round | 29/10/2016 | Notts County | - | Luton Town | 0:0 | ||||
| 16. Round | 12/11/2016 | Blackpool FC | - | Notts County | 4:0 | ||||
| 17. Round | 19/11/2016 | Notts County | - | Newport County | 0:3 | ||||
| 18. Round | 22/11/2016 | Notts County | - | Cambridge United | 0:1 | ||||
| 19. Round | 26/11/2016 | Barnet FC | - | Notts County | 3:2 | ||||
| 20. Round | 10/12/2016 | Notts County | - | Wycombe Wanderers | 0:2 | ||||
| 22. Round | 26/12/2016 | Notts County | - | Doncaster Rovers | 0:1 | ||||
| 24. Round | 02/01/2017 | Cambridge United | - | Notts County | 4:0 | ||||
| 25. Round | 07/01/2017 | Morecambe FC | - | Notts County | 4:1 |
Wales