| 19. Round | 25/11/2006 | Peterborough United | - | Torquay United | 5:2 | ||||
| 21. Round | 09/12/2006 | Rochdale AFC | - | Peterborough United | 0:1 | ||||
| 22. Round | 16/12/2006 | Peterborough United | - | Chester City | 0:2 | ||||
| 23. Round | 23/12/2006 | Peterborough United | - | Lincoln City | 1:2 | ||||
| 24. Round | 26/12/2006 | Barnet FC | - | Peterborough United | 1:0 | ||||
| 26. Round | 01/01/2007 | Peterborough United | - | Walsall FC | 0:2 | ||||
| 28. Round | 13/01/2007 | Darlington FC | - | Peterborough United | 3:1 |  |
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| 29. Round | 20/01/2007 | Peterborough United | - | Stockport County | 0:3 | ||||
| 46. Round | 05/05/2007 | Peterborough United | - | Rochdale AFC | 3:3 |
England