| 29. Round | 28/01/2025 | Bolton Wanderers | - | Northampton Town | 3:1 | ||||
| 30. Round | 01/02/2025 | Reading FC | - | Bolton Wanderers | 1:0 | ||||
| 31. Round | 08/02/2025 | Bolton Wanderers | - | Crawley Town | 4:3 |  |
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| 32. Round | 15/02/2025 | Shrewsbury Town | - | Bolton Wanderers | 2:3 | ||||
| 33. Round | 22/02/2025 | Bolton Wanderers | - | Leyton Orient | 2:1 | ||||
| 34. Round | 01/03/2025 | Wrexham AFC | - | Bolton Wanderers | 0:0 | ||||
| 36. Round | 08/03/2025 | Burton Albion | - | Bolton Wanderers | 1:2 |  |
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| 19. Round | 11/03/2025 | Bristol Rovers | - | Bolton Wanderers | 3:2 | ||||
| 42. Round | 12/04/2025 | Barnsley FC | - | Bolton Wanderers | 4:1 | ||||
| 43. Round | 18/04/2025 | Bolton Wanderers | - | Wycombe Wanderers | 0:2 | ||||
| 44. Round | 21/04/2025 | Lincoln City | - | Bolton Wanderers | 4:2 | |
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| 45. Round | 26/04/2025 | Peterborough United | - | Bolton Wanderers | 1:1 | ||||
| 46. Round | 03/05/2025 | Bolton Wanderers | - | Stevenage FC | 1:1 |
Ireland