| 31. Round | 03/02/2024 | Peterborough United | - | Wigan Athletic | 2:3 | ||||
| 32. Round | 10/02/2024 | Wigan Athletic | - | Exeter City | 1:2 |  |
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| 33. Round | 13/02/2024 | Oxford United | - | Wigan Athletic | 4:2 | ||||
| 35. Round | 23/02/2024 | Wigan Athletic | - | Cheltenham Town | 1:1 | ||||
| 37. Round | 09/03/2024 | Wigan Athletic | - | Leyton Orient | 1:0 | ||||
| 38. Round | 12/03/2024 | Wycombe Wanderers | - | Wigan Athletic | 1:0 | ||||
| 39. Round | 16/03/2024 | Wigan Athletic | - | Blackpool FC | 1:0 | ||||
| 41. Round | 29/03/2024 | Wigan Athletic | - | Burton Albion | 1:1 | ||||
| 42. Round | 01/04/2024 | Cambridge United | - | Wigan Athletic | 3:1 | ||||
| 43. Round | 06/04/2024 | Wigan Athletic | - | Port Vale FC | 0:0 |  |
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| 40. Round | 09/04/2024 | Charlton Athletic | - | Wigan Athletic | 2:2 | |
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| 44. Round | 13/04/2024 | Lincoln City | - | Wigan Athletic | 1:2 | ||||
| 45. Round | 20/04/2024 | Portsmouth FC | - | Wigan Athletic | 1:2 | ||||
| 46. Round | 27/04/2024 | Wigan Athletic | - | Bristol Rovers | 2:0 |
England