| 2. Round | 13/08/2016 | Wigan Athletic | - | Blackburn Rovers | 3:0 | ||||
| 3. Round | 16/08/2016 | Wigan Athletic | - | Birmingham City | 1:1 |  |
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| 4. Round | 20/08/2016 | Nottingham Forest | - | Wigan Athletic | 4:3 | ||||
| 5. Round | 27/08/2016 | Wigan Athletic | - | Queens Park Rangers | 0:1 | ||||
| 7. Round | 13/09/2016 | Norwich City | - | Wigan Athletic | 2:1 | ||||
| 9. Round | 23/09/2016 | Preston North End | - | Wigan Athletic | 1:0 | ||||
| 12. Round | 15/10/2016 | Wigan Athletic | - | Burton Albion | 0:0 | ||||
| 14. Round | 22/10/2016 | Wigan Athletic | - | Brighton & Hove Albion | 0:1 | ||||
| 15. Round | 29/10/2016 | Cardiff City | - | Wigan Athletic | 0:1 | ||||
| 17. Round | 19/11/2016 | Barnsley FC | - | Wigan Athletic | 0:0 | ||||
| 18. Round | 28/11/2016 | Huddersfield Town | - | Wigan Athletic | 1:2 | ||||
| 21. Round | 14/12/2016 | Wigan Athletic | - | Newcastle United | 0:2 | ||||
| 23. Round | 26/12/2016 | Rotherham United | - | Wigan Athletic | 3:2 |  |
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| 25. Round | 02/01/2017 | Wigan Athletic | - | Huddersfield Town | 0:1 |
England