3. Round | 25/08/2012 | Northampton Town | - | Southend United | 3:3 | ||||
5. Round | 08/09/2012 | Southend United | - | Dagenham & Redbridge | 3:1 | ||||
6. Round | 15/09/2012 | Cheltenham Town | - | Southend United | 1:3 | ||||
7. Round | 18/09/2012 | Gillingham FC | - | Southend United | 1:0 | ||||
8. Round | 22/09/2012 | Southend United | - | Exeter City | 2:1 | ||||
9. Round | 29/09/2012 | Plymouth Argyle | - | Southend United | 1:1 | ||||
10. Round | 02/10/2012 | Southend United | - | Burton Albion | 0:1 | ||||
11. Round | 06/10/2012 | Southend United | - | Barnet FC | 2:2 | ||||
12. Round | 13/10/2012 | Rotherham United | - | Southend United | 0:3 | ||||
13. Round | 20/10/2012 | Morecambe FC | - | Southend United | 1:0 | ||||
14. Round | 23/10/2012 | Southend United | - | Aldershot Town | 1:2 | ||||
15. Round | 27/10/2012 | Southend United | - | York City | 0:0 | ||||
25. Round | 29/12/2012 | Burton Albion | - | Southend United | 2:0 | ||||
28. Round | 12/01/2013 | Exeter City | - | Southend United | 3:0 |