| 39. Round | 25/03/2007 | Milton Keynes Dons | - | Walsall FC | 1:1 | ||||
| 40. Round | 31/03/2007 | Hereford United | - | Milton Keynes Dons | 0:0 | ||||
| 41. Round | 07/04/2007 | Milton Keynes Dons | - | Grimsby Town | 1:2 | ||||
| 42. Round | 09/04/2007 | Shrewsbury Town | - | Milton Keynes Dons | 2:1 |  |
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| 43. Round | 14/04/2007 | Milton Keynes Dons | - | Darlington FC | 1:0 | ||||
| 44. Round | 21/04/2007 | Stockport County | - | Milton Keynes Dons | 1:2 | ||||
| 45. Round | 28/04/2007 | Wycombe Wanderers | - | Milton Keynes Dons | 0:2 | ||||
| 46. Round | 05/05/2007 | Milton Keynes Dons | - | Accrington Stanley | 3:1 |
England