| 31. Round | 05/02/2007 | Scunthorpe United | - | Bristol City | 1:0 | ||||
| 33. Round | 17/02/2007 | Scunthorpe United | - | Rotherham United | 1:0 | ||||
| 34. Round | 20/02/2007 | Swansea City | - | Scunthorpe United | 0:2 |  |
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| 35. Round | 24/02/2007 | Scunthorpe United | - | Gillingham FC | 3:1 | ||||
| 36. Round | 03/03/2007 | Brentford FC | - | Scunthorpe United | 0:2 | ||||
| 39. Round | 24/03/2007 | Leyton Orient | - | Scunthorpe United | 2:2 | ||||
| 40. Round | 31/03/2007 | Scunthorpe United | - | Bradford City | 2:0 | ||||
| 41. Round | 06/04/2007 | Scunthorpe United | - | Yeovil Town | 1:0 | ||||
| 42. Round | 09/04/2007 | Northampton Town | - | Scunthorpe United | 2:1 | ||||
| 43. Round | 14/04/2007 | Scunthorpe United | - | Huddersfield Town | 2:0 | ||||
| 44. Round | 21/04/2007 | Tranmere Rovers | - | Scunthorpe United | 0:2 | ||||
| 45. Round | 28/04/2007 | Blackpool FC | - | Scunthorpe United | 3:1 | ||||
| 46. Round | 05/05/2007 | Scunthorpe United | - | Carlisle United | 3:0 |
England