| 28. Round | 12/01/2013 | Gillingham FC | - | Port Vale FC | 1:2 |  |
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| 30. Round | 24/01/2013 | AFC Wimbledon | - | Port Vale FC | 2:2 | ||||
| 31. Round | 02/02/2013 | Port Vale FC | - | Accrington Stanley | 3:0 | |
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| 23. Round | 05/02/2013 | Port Vale FC | - | AFC Wimbledon | 3:0 | |
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| 32. Round | 09/02/2013 | Barnet FC | - | Port Vale FC | 0:0 | ||||
| 33. Round | 16/02/2013 | Port Vale FC | - | Morecambe FC | 0:1 | ||||
| 35. Round | 26/02/2013 | Port Vale FC | - | Exeter City | 0:2 | ||||
| 36. Round | 02/03/2013 | Oxford United | - | Port Vale FC | 2:1 | ||||
| 29. Round | 05/03/2013 | Port Vale FC | - | Bradford City | 0:0 | ||||
| 37. Round | 09/03/2013 | Port Vale FC | - | Southend United | 1:2 | |
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| 38. Round | 12/03/2013 | Bristol Rovers | - | Port Vale FC | 2:0 | ||||
| 39. Round | 16/03/2013 | York City | - | Port Vale FC | 0:2 | |
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| 41. Round | 29/03/2013 | Port Vale FC | - | Cheltenham Town | 3:2 | ||||
| 43. Round | 05/04/2013 | Port Vale FC | - | Burton Albion | 7:1 | |
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| 40. Round | 09/04/2013 | Port Vale FC | - | Aldershot Town | 1:1 | |
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| 44. Round | 13/04/2013 | Rochdale AFC | - | Port Vale FC | 2:2 | ||||
| 45. Round | 20/04/2013 | Port Vale FC | - | Northampton Town | 2:2 | |
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| 46. Round | 27/04/2013 | Wycombe Wanderers | - | Port Vale FC | 1:1 | |
England