| 15. Round | 25/10/2011 | Barnet FC | - | Southend United | 0:3 | ||||
| 16. Round | 29/10/2011 | Macclesfield Town | - | Southend United | 0:2 | ||||
| 17. Round | 05/11/2011 | Southend United | - | Oxford United | 2:1 | ||||
| 18. Round | 19/11/2011 | Dagenham & Redbridge | - | Southend United | 2:3 | ||||
| 19. Round | 26/11/2011 | Southend United | - | Bristol Rovers | 1:1 | ||||
| 20. Round | 10/12/2011 | Cheltenham Town | - | Southend United | 3:0 | ||||
| 21. Round | 16/12/2011 | Southend United | - | Bradford City | 0:1 | ||||
| 23. Round | 31/12/2011 | AFC Wimbledon | - | Southend United | 1:4 | ||||
| 24. Round | 02/01/2012 | Southend United | - | Dagenham & Redbridge | 1:1 |
England
