| 6. Round | 25/08/2012 | SpVgg Unterhaching | - | VfB Stuttgart II | 0:3 | ||||
| 7. Round | 29/08/2012 | VfB Stuttgart II | - | SV Babelsberg 03 | 2:1 | ||||
| 9. Round | 14/09/2012 | VfB Stuttgart II | - | Chemnitzer FC | 0:1 | ||||
| 13. Round | 06/10/2012 | VfB Stuttgart II | - | 1. FC Heidenheim 1846 | 0:2 | ||||
| 24. Round | 02/02/2013 | Stuttgarter Kickers | - | VfB Stuttgart II | 3:0 | ||||
| 21. Round | 05/02/2013 | VfB Stuttgart II | - | Kickers Offenbach | 1:0 |  |
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| 29. Round | 09/03/2013 | VfB Stuttgart II | - | SV Darmstadt 98 | 0:2 | ||||
| 32. Round | 06/04/2013 | 1. FC Heidenheim 1846 | - | VfB Stuttgart II | 1:0 | ||||
| 33. Round | 13/04/2013 | VfB Stuttgart II | - | Hallescher FC | 3:0 | ||||
| 34. Round | 20/04/2013 | VfB Stuttgart II | - | Wacker Burghausen | 0:0 | ||||
| 35. Round | 27/04/2013 | VfL Osnabrück | - | VfB Stuttgart II | 2:0 | ||||
| 36. Round | 03/05/2013 | VfB Stuttgart II | - | Arminia Bielefeld | 0:1 | ||||
| 37. Round | 11/05/2013 | Alemannia Aachen | - | VfB Stuttgart II | 4:2 |  |
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| 38. Round | 18/05/2013 | VfB Stuttgart II | - | Borussia Dortmund II | 0:1 |
Serbia
Netherlands